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autoencodix
/
Ontix-Dim16-KimiK3
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autoencodix
6
Feature Extraction
autoencodix
single-cell
scRNA-seq
autoencoder
variational-autoencoder
explainable-ai
biology
License:
apache-2.0
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Ontix-Dim16-KimiK3
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7 commits
jan-eforest
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11 days ago
ontology
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15 days ago
.gitattributes
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15 days ago
README.md
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11 days ago
large_ontix_final_model_Dim16_KimiK3.pkl
Unsafe
pickle
Detected Pickle imports (60)
"autoencodix.configs.default_config.DataCase"
,
"lightning_fabric.strategies.single_device.SingleDeviceStrategy"
,
"torch._utils._rebuild_tensor_v2"
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"anndata._core.aligned_mapping.Layers"
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"pandas.core.indexes.base._new_Index"
,
"numpy.dtype"
,
"pandas.core.indexes.base.Index"
,
"lightning_fabric.plugins.environments.slurm.SLURMEnvironment"
,
"autoencodix.utils._screader.SingleCellDataReader"
,
"autoencodix.utils._result.LossRegistry"
,
"pandas.core.internals.managers.BlockManager"
,
"autoencodix.configs.ontix_config.OntixConfig"
,
"autoencodix.data.general_preprocessor.GeneralPreprocessor"
,
"torch.device"
,
"anndata._core.aligned_mapping.AxisArrays"
,
"autoencodix.data._datasplitter.DataSplitter"
,
"pandas.core.indexes.range.RangeIndex"
,
"autoencodix.utils._imgreader.ImageDataReader"
,
"autoencodix.configs.default_config.DataConfig"
,
"dill._dill._create_array"
,
"pandas.core.frame.DataFrame"
,
"numpy._core.multiarray._reconstruct"
,
"autoencodix.data._numeric_dataset.NumericDataset"
,
"autoencodix.data._datasetcontainer.DatasetContainer"
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"lightning_fabric.accelerators.cuda.CUDAAccelerator"
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"autoencodix.utils._result.Result"
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"dill._dill._load_type"
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"typing.Any"
,
"typing.Dict"
,
"anndata._core.aligned_mapping.PairwiseArrays"
,
"torch.nn.modules.dropout.Dropout"
,
"torch.nn.modules.container.Sequential"
,
"autoencodix.modeling._ontix_architecture.OntixArchitecture"
,
"autoencodix.ontix.Ontix"
,
"autoencodix.trainers._ontix_trainer.OntixTrainer"
,
"autoencodix.data.datapackage.DataPackage"
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"autoencodix.utils._traindynamics.TrainingDynamics"
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"lightning_fabric.fabric.Fabric._wrap_and_launch"
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"numpy.ndarray"
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"torch._utils._rebuild_parameter"
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"torch.nn.modules.activation.ReLU"
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"torch.nn.modules.batchnorm.BatchNorm1d"
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"autoencodix.losses.varix_loss.VarixLoss"
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"autoencodix.utils._bulkreader.BulkDataReader"
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"collections.OrderedDict"
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"collections.defaultdict"
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"_operator.getitem"
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"autoencodix.utils._utils.nested_dict"
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"anndata._core.anndata.AnnData"
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"lightning_fabric.fabric.Fabric.run"
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"autoencodix.evaluate._general_evaluator.GeneralEvaluator"
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"torch.storage._load_from_bytes"
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"typing.Union"
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"lightning_fabric.connector._Connector"
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"autoencodix.visualize._general_visualizer.GeneralVisualizer"
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"torch.nn.modules.linear.Linear"
,
"anndata._core.file_backing.AnnDataFileManager"
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"signal.SIGUSR1"
,
"lightning_fabric.fabric.Fabric"
How to fix it?
113 MB
xet
Upload large_ontix_final_model_Dim16_KimiK3.pkl with huggingface_hub
15 days ago
large_ontix_final_model_Dim16_KimiK3_model.pth
110 MB
xet
Upload large_ontix_final_model_Dim16_KimiK3_model.pth with huggingface_hub
15 days ago
large_ontix_final_model_Dim16_KimiK3_preprocessor.pkl
Unsafe
pickle
Detected Pickle imports (13)
"autoencodix.data.general_preprocessor.GeneralPreprocessor"
,
"autoencodix.data.datapackage.DataPackage"
,
"dill._dill._load_type"
,
"autoencodix.utils._bulkreader.BulkDataReader"
,
"typing.Dict"
,
"autoencodix.utils._imgreader.ImageDataReader"
,
"_operator.getitem"
,
"autoencodix.configs.ontix_config.OntixConfig"
,
"autoencodix.configs.default_config.DataConfig"
,
"autoencodix.configs.default_config.DataCase"
,
"typing.Any"
,
"autoencodix.utils._screader.SingleCellDataReader"
,
"typing.Union"
How to fix it?
216 kB
xet
Upload large_ontix_final_model_Dim16_KimiK3_preprocessor.pkl with huggingface_hub
15 days ago