Datasets:

marin-dna
/

evals_complex_traits

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Split (2)

train · 11.6k rows

chrom stringclasses 12 values	pos int64 36.1k 249M	ref stringclasses 4 values	alt stringclasses 4 values	label bool 2 classes	subset stringclasses 8 values	match_group int64 0 2.16k	rsid stringlengths 3 15	pip float64 0 1	traits stringclasses 279 values	MAF float64 0 0.5	ld_score float64 1.01 3.79k	consequence stringclasses 13 values	consequence_cre stringclasses 29 values	exon_closest_pc_gene_id stringlengths 15 15	distance_exon_pc int64 0 1.68M	exon_closest_nc_gene_id stringlengths 15 15	distance_exon_nc int64 0 507k	distance_exon int64 0 507k	exon_closest_gene_id stringlengths 15 15	consequence_final stringclasses 28 values	tss_closest_pc_gene_id stringlengths 15 15	distance_tss_pc int64 0 1.69M	tss_closest_nc_gene_id stringlengths 15 15	distance_tss_nc int64 0 531k	distance_tss int64 0 531k	tss_closest_gene_id stringlengths 15 15	consequence_group stringclasses 8 values	distance_tss_pc_bin stringclasses 4 values	distance_exon_pc_bin stringclasses 7 values
X	40,580,182	G	A	false	tss_proximal	2,162	rs2968915	0.000048		0.10079	105.74	intron_variant	pELS	ENSG00000182220	434	ENSG00000182220	717	434	ENSG00000182220	tss_proximal	ENSG00000182220	711	ENSG00000182220	717	711	ENSG00000182220	tss_proximal	tss_prox:b1	tss_prox:b1
X	41,087,955	G	A	false	distal	2,152	rs765827935	0.000013		0.003138	10.322	intron_variant	pELS_flank	ENSG00000124486	1,845	ENSG00000237931	10,204	1,845	ENSG00000124486	pELS_flank	ENSG00000124486	2,509	ENSG00000237931	10,955	2,509	ENSG00000124486	distal	NA	NA
X	41,543,181	T	C	false	distal	2,146	rs144945901	0.000015		0.042751	20.848	intron_variant	dELS	ENSG00000147044	374	ENSG00000147044	374	374	ENSG00000147044	dELS	ENSG00000147044	8,280	ENSG00000147044	13,053	8,280	ENSG00000147044	distal	NA	NA
X	41,686,990	T	C	false	distal	2,132	rs1023064	0.000016		0.42927	92.414	intron_variant	pELS	ENSG00000171659	1,982	ENSG00000242559	3,527	1,982	ENSG00000171659	pELS	ENSG00000171659	1,982	ENSG00000242559	3,527	1,982	ENSG00000171659	distal	NA	NA
X	41,715,448	C	T	false	distal	2,161	rs6520764	0.000019		0.31476	71.591	intron_variant	dELS_flank	ENSG00000171657	8,732	ENSG00000171657	12,684	8,732	ENSG00000171657	dELS_flank	ENSG00000171657	8,732	ENSG00000171657	12,684	8,732	ENSG00000171657	distal	NA	NA
X	41,900,862	C	T	false	distal	2,155	rs2801154	0.00002		0.22071	266.74	intron_variant	CA_flank	ENSG00000147044	22,067	ENSG00000251807	18,391	18,391	ENSG00000251807	CA_flank	ENSG00000147044	22,144	ENSG00000251807	18,486	18,486	ENSG00000251807	distal	NA	NA
X	42,739,471	C	G	false	distal	2,143	rs5964206	0.000004		0.10416	220.52	intron_variant	dELS	ENSG00000102055	37,894	ENSG00000287223	12,416	12,416	ENSG00000287223	dELS	ENSG00000102055	38,691	ENSG00000287223	16,420	16,420	ENSG00000287223	distal	NA	NA
X	42,739,489	T	C	false	distal	2,143	rs4145437	0.000004		0.10416	220.52	intron_variant	dELS	ENSG00000102055	37,876	ENSG00000287223	12,434	12,434	ENSG00000287223	dELS	ENSG00000102055	38,673	ENSG00000287223	16,402	16,402	ENSG00000287223	distal	NA	NA
X	42,739,539	T	C	false	distal	2,143	rs5964207	0.000004		0.10416	220.52	intron_variant	dELS	ENSG00000102055	37,826	ENSG00000287223	12,484	12,484	ENSG00000287223	dELS	ENSG00000102055	38,623	ENSG00000287223	16,352	16,352	ENSG00000287223	distal	NA	NA
X	42,992,514	C	T	false	distal	2,142	rs6609213	0.000004		0.40511	96.966	intergenic_variant	dELS	ENSG00000102055	214,350	ENSG00000270280	7,659	7,659	ENSG00000270280	dELS	ENSG00000102055	214,350	ENSG00000270280	7,659	7,659	ENSG00000270280	distal	NA	NA
X	43,588,145	A	G	false	distal	2,156	rs149813902	0.000005		0.006237	17.66	intergenic_variant	intergenic_variant	ENSG00000189221	66,761	ENSG00000189221	68,064	66,761	ENSG00000189221	intergenic_variant	ENSG00000189221	66,761	ENSG00000189221	68,064	66,761	ENSG00000189221	distal	NA	NA
X	44,017,916	C	T	true	distal	2,143	rs12838407	0.999715	eBMD	0.10023	21.042	intergenic_variant	dELS	ENSG00000124479	44,520	ENSG00000214019	11,415	11,415	ENSG00000214019	dELS	ENSG00000124479	44,520	ENSG00000214019	11,415	11,415	ENSG00000214019	distal	NA	NA
X	44,017,929	T	C	true	distal	2,144	rs5906421	0.93887	eBMD	0.29659	57.996	intergenic_variant	dELS	ENSG00000124479	44,533	ENSG00000214019	11,402	11,402	ENSG00000214019	dELS	ENSG00000124479	44,533	ENSG00000214019	11,402	11,402	ENSG00000214019	distal	NA	NA
X	44,312,707	T	C	false	missense_variant	2,136	rs17146914	0.00001		0.068436	62.418	missense_variant	missense_variant	ENSG00000183690	0	ENSG00000214018	2,230	0	ENSG00000183690	missense_variant	ENSG00000183690	30,964	ENSG00000214018	2,230	2,230	ENSG00000214018	missense_variant	NA	NA
X	45,151,773	C	A	false	missense_variant	2,135	rs143817529	0.000026		0.000154	79.127	missense_variant	missense_variant	ENSG00000147113	0	ENSG00000147113	0	0	ENSG00000147113	missense_variant	ENSG00000147113	49,102	ENSG00000229491	31,477	31,477	ENSG00000229491	missense_variant	NA	NA
X	45,151,851	C	T	false	missense_variant	2,135	rs148151608	0.000026		0.000252	139.48	missense_variant	missense_variant	ENSG00000147113	0	ENSG00000147113	0	0	ENSG00000147113	missense_variant	ENSG00000147113	49,024	ENSG00000229491	31,399	31,399	ENSG00000229491	missense_variant	NA	NA
X	45,750,106	T	C	false	distal	2,145	rs2143487	0.000028		0.3082	51.72	intron_variant	dELS	ENSG00000147113	549,204	ENSG00000207725	2,981	2,981	ENSG00000207725	dELS	ENSG00000147113	549,204	ENSG00000207725	2,981	2,981	ENSG00000207725	distal	NA	NA
X	45,775,174	C	A	true	distal	2,145	rs56976399	0.999915	Height	0.32976	49.829	intergenic_variant	dELS	ENSG00000147113	574,272	ENSG00000270069	4,899	4,899	ENSG00000270069	dELS	ENSG00000147113	574,272	ENSG00000270069	4,899	4,899	ENSG00000270069	distal	NA	NA
X	45,783,201	C	T	false	distal	2,145	rs5906073	0.000219		0.38489	49.402	intergenic_variant	dELS	ENSG00000147113	582,299	ENSG00000270069	12,926	12,926	ENSG00000270069	dELS	ENSG00000147113	582,299	ENSG00000270069	12,926	12,926	ENSG00000270069	distal	NA	NA
X	46,590,591	A	G	false	distal	2,147	rs5952909	0.002272		0.34063	267.82	intron_variant	dELS	ENSG00000147119	7,168	ENSG00000065923	15,669	7,168	ENSG00000147119	dELS	ENSG00000147119	16,825	ENSG00000270499	27,841	16,825	ENSG00000147119	distal	NA	NA
X	47,455,193	C	T	false	distal	2,154	rs55876711	0.000099		0.031999	28.097	intron_variant	CA_flank	ENSG00000147124	727	ENSG00000147124	727	727	ENSG00000147124	CA_flank	ENSG00000147124	12,354	ENSG00000147124	12,354	12,354	ENSG00000147124	distal	NA	NA
X	47,455,231	G	A	false	distal	2,154	rs11797962	0.000038		0.029395	56.888	intron_variant	CA_flank	ENSG00000147124	689	ENSG00000147124	689	689	ENSG00000147124	CA_flank	ENSG00000147124	12,316	ENSG00000147124	12,316	12,316	ENSG00000147124	distal	NA	NA
X	47,481,128	G	A	false	distal	2,131	rs150321593	0.000426		0.062608	30.245	intron_variant	pELS	ENSG00000147124	1,330	ENSG00000196741	2,442	1,330	ENSG00000147124	pELS	ENSG00000147124	1,456	ENSG00000196741	2,442	1,456	ENSG00000147124	distal	NA	NA
X	47,496,999	T	C	false	distal	2,161	rs6608728	0.000226		0.30748	172.47	intergenic_variant	dELS_flank	ENSG00000147124	13,776	ENSG00000196741	12,175	12,175	ENSG00000196741	dELS_flank	ENSG00000147124	13,776	ENSG00000196741	13,427	13,427	ENSG00000196741	distal	NA	NA
X	48,356,805	G	C	false	tss_proximal	2,151	rs5906652	0.000266		0.056111	66.028	upstream_gene_variant	PLS	ENSG00000165584	97	ENSG00000225055	319	97	ENSG00000165584	tss_proximal	ENSG00000165584	97	ENSG00000225055	319	97	ENSG00000165584	tss_proximal	tss_prox:b0	tss_prox:b0
X	48,356,806	T	C	false	tss_proximal	2,151	rs5906653	0.000266		0.056149	66.009	upstream_gene_variant	PLS	ENSG00000165584	98	ENSG00000225055	318	98	ENSG00000165584	tss_proximal	ENSG00000165584	98	ENSG00000225055	318	98	ENSG00000165584	tss_proximal	tss_prox:b0	tss_prox:b0
X	48,468,392	C	T	true	tss_proximal	2,151	rs5906672	0.999785	AG,MCH,MCV,NAP,TP	0.041188	38.219	intron_variant	pELS	ENSG00000017483	3	ENSG00000017483	1,331	3	ENSG00000017483	tss_proximal	ENSG00000017483	3	ENSG00000017483	1,331	3	ENSG00000017483	tss_proximal	tss_prox:b0	tss_prox:b0
X	48,741,909	G	A	false	distal	2,148	rs192136330	0.004658		0.011527	19.979	intergenic_variant	dELS	ENSG00000171433	19,837	ENSG00000232828	4,745	4,745	ENSG00000232828	dELS	ENSG00000171433	19,837	ENSG00000232828	4,745	4,745	ENSG00000232828	distal	NA	NA
X	48,787,974	G	A	true	distal	2,152	rs146587548	1	Eosino	0.009384	23.475	intron_variant	pELS_flank	ENSG00000102145	1,328	ENSG00000207367	10,902	1,328	ENSG00000102145	pELS_flank	ENSG00000102145	1,383	ENSG00000207367	10,902	1,383	ENSG00000102145	distal	NA	NA
X	48,990,853	C	T	false	tss_proximal	2,141	rs140680685	0.000258		0.022195	14.647	intron_variant	CA	ENSG00000068400	72	ENSG00000068400	72	72	ENSG00000068400	tss_proximal	ENSG00000068400	6,993	ENSG00000068400	532	532	ENSG00000068400	tss_proximal	tss_prox:b2	tss_prox:b0
X	49,068,855	G	C	false	3_prime_UTR_variant	2,133	rs182072874	0.000063		0.005333	9.3958	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000147144	0	ENSG00000147144	0	0	ENSG00000147144	3_prime_UTR_variant	ENSG00000243279	5,133	ENSG00000147144	2,459	2,459	ENSG00000147144	3_prime_UTR_variant	NA	NA
X	49,627,296	C	T	false	distal	2,148	rs182225118	0.000043		0.005968	12.006	intergenic_variant	dELS	ENSG00000205777	18,757	ENSG00000213856	5,203	5,203	ENSG00000213856	dELS	ENSG00000205777	28,275	ENSG00000213856	6,052	6,052	ENSG00000213856	distal	NA	NA
X	49,627,331	C	T	false	distal	2,148	rs190945572	0.000155		0.007887	13.039	intergenic_variant	dELS	ENSG00000205777	18,792	ENSG00000213856	5,168	5,168	ENSG00000213856	dELS	ENSG00000205777	28,310	ENSG00000213856	6,017	6,017	ENSG00000213856	distal	NA	NA
X	49,775,080	T	C	true	distal	2,153	rs73211727	0.99999	Alb	0.037754	9.9029	intergenic_variant	CA-CTCF	ENSG00000101951	54,179	ENSG00000101951	54,267	54,179	ENSG00000101951	CA-CTCF	ENSG00000101951	54,179	ENSG00000101951	54,267	54,179	ENSG00000101951	distal	NA	NA
X	51,486,831	A	G	false	distal	2,150	rs5945572	0.000077		0.36618	608.48	intergenic_variant	dELS	ENSG00000196368	3,179	ENSG00000234766	11,658	3,179	ENSG00000196368	dELS	ENSG00000196368	9,760	ENSG00000234766	15,458	9,760	ENSG00000196368	distal	NA	NA
X	52,921,554	C	G	false	distal	2,148	rs140894384	0.000024		0.010838	9.0836	intergenic_variant	dELS	ENSG00000179304	12,993	ENSG00000286118	4,401	4,401	ENSG00000286118	dELS	ENSG00000179304	22,170	ENSG00000286118	4,401	4,401	ENSG00000286118	distal	NA	NA
X	52,932,868	T	C	false	distal	2,148	rs139819643	0.000158		0.01542	7.9474	intron_variant	dELS	ENSG00000268350	14,385	ENSG00000286118	3,293	3,293	ENSG00000286118	dELS	ENSG00000268350	24,378	ENSG00000286118	6,911	6,911	ENSG00000286118	distal	NA	NA
X	53,263,645	C	A	false	distal	2,146	rs12013178	0.000029		0.050188	52.228	intron_variant	dELS	ENSG00000124313	2,678	ENSG00000124313	2,682	2,678	ENSG00000124313	dELS	ENSG00000124313	13,117	ENSG00000124313	15,198	13,117	ENSG00000124313	distal	NA	NA
X	53,264,405	T	C	false	distal	2,146	rs6529667	0.000048		0.0551	36.474	intron_variant	dELS	ENSG00000124313	1,918	ENSG00000124313	1,922	1,918	ENSG00000124313	dELS	ENSG00000124313	13,877	ENSG00000124313	15,958	13,877	ENSG00000124313	distal	NA	NA
X	53,430,838	G	C	false	3_prime_UTR_variant	2,133	rs150545744	0.000228		0.007034	11.502	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000158423	0	ENSG00000072506	419	0	ENSG00000158423	3_prime_UTR_variant	ENSG00000072506	3,511	ENSG00000072506	1,483	1,483	ENSG00000072506	3_prime_UTR_variant	NA	NA
X	53,557,457	G	A	false	tss_proximal	2,141	rs17276588	0.000078		0.023914	15.651	intron_variant	intron_variant	ENSG00000086758	29	ENSG00000208012	182	29	ENSG00000086758	tss_proximal	ENSG00000086758	7,951	ENSG00000208012	182	182	ENSG00000208012	tss_proximal	tss_prox:b2	tss_prox:b0
X	53,611,867	A	T	false	distal	2,139	rs191337589	0.000049		0.00389	10.917	intron_variant	TF_flank	ENSG00000086758	2,666	ENSG00000086758	2,666	2,666	ENSG00000086758	TF_flank	ENSG00000086758	16,658	ENSG00000086758	13,610	13,610	ENSG00000086758	distal	NA	NA
X	54,181,679	G	A	false	distal	2,131	rs12688331	0.007034		0.069393	124.32	intron_variant	pELS	ENSG00000184083	820	ENSG00000184083	820	820	ENSG00000184083	pELS	ENSG00000184083	1,574	ENSG00000184083	1,098	1,098	ENSG00000184083	distal	NA	NA
X	54,813,580	C	T	false	tss_proximal	2,140	rs763183	0.004988		0.34315	377.67	intron_variant	intron_variant	ENSG00000102316	29	ENSG00000102316	245	29	ENSG00000102316	tss_proximal	ENSG00000102316	4,519	ENSG00000221716	789	789	ENSG00000221716	tss_proximal	tss_prox:b2	tss_prox:b0
X	55,015,172	G	A	true	distal	2,146	rs17250674	0.998275	MCV	0.04697	46.419	intron_variant	dELS	ENSG00000158578	156	ENSG00000158578	2,387	156	ENSG00000158578	dELS	ENSG00000158578	5,260	ENSG00000169188	14,778	5,260	ENSG00000158578	distal	NA	NA
X	55,017,755	C	G	true	distal	2,154	rs41308048	1	MCH,MCV	0.022402	17.204	intron_variant	CA_flank	ENSG00000158578	89	ENSG00000158578	89	89	ENSG00000158578	CA_flank	ENSG00000158578	2,677	ENSG00000158578	13,221	2,677	ENSG00000158578	distal	NA	NA
X	55,346,548	G	C	false	distal	2,158	rs4332268	0.001058		0.25811	935	intergenic_variant	intergenic_variant	ENSG00000204279	81,631	ENSG00000232765	57,762	57,762	ENSG00000232765	intergenic_variant	ENSG00000204279	81,631	ENSG00000232765	65,176	65,176	ENSG00000232765	distal	NA	NA
X	55,346,740	G	A	false	distal	2,158	rs141682759	0.001152		0.25743	935.55	intergenic_variant	intergenic_variant	ENSG00000204279	81,823	ENSG00000232765	57,954	57,954	ENSG00000232765	intergenic_variant	ENSG00000204279	81,823	ENSG00000232765	65,368	65,368	ENSG00000232765	distal	NA	NA
X	55,383,639	C	T	true	distal	2,156	rs748204138	0.99851	Testosterone_M	0.001772	10.232	intergenic_variant	intergenic_variant	ENSG00000187601	68,487	ENSG00000283334	67,855	67,855	ENSG00000283334	intergenic_variant	ENSG00000187601	68,487	ENSG00000266328	67,855	67,855	ENSG00000266328	distal	NA	NA
X	55,731,311	T	G	false	tss_proximal	2,141	rs5960480	0.000098		0.02139	660.25	intron_variant	intron_variant	ENSG00000083750	52	ENSG00000083750	52	52	ENSG00000083750	tss_proximal	ENSG00000083750	13,425	ENSG00000083750	89	89	ENSG00000083750	tss_proximal	tss_prox:b2	tss_prox:b0
X	62,540,525	A	G	false	distal	2,157	rs9699002	0.000367		0.08762	30.74	intergenic_variant	intergenic_variant	ENSG00000186767	806,702	ENSG00000236852	238,724	238,724	ENSG00000236852	intergenic_variant	ENSG00000186767	810,806	ENSG00000236852	238,724	238,724	ENSG00000236852	distal	NA	NA
X	62,547,148	T	A	false	distal	2,157	rs148814653	0.000053		0.01782	30.049	intergenic_variant	intergenic_variant	ENSG00000186767	800,079	ENSG00000236852	232,101	232,101	ENSG00000236852	intergenic_variant	ENSG00000186767	804,183	ENSG00000236852	232,101	232,101	ENSG00000236852	distal	NA	NA
X	62,547,751	A	G	false	distal	2,157	rs12556445	0.000351		0.13765	41.579	intergenic_variant	intergenic_variant	ENSG00000186767	799,476	ENSG00000236852	231,498	231,498	ENSG00000236852	intergenic_variant	ENSG00000186767	803,580	ENSG00000236852	231,498	231,498	ENSG00000236852	distal	NA	NA
X	62,550,379	G	A	false	distal	2,157	rs750555429	0.000039		0.021225	19.538	intergenic_variant	intergenic_variant	ENSG00000186767	796,848	ENSG00000236852	228,870	228,870	ENSG00000236852	intergenic_variant	ENSG00000186767	800,952	ENSG00000236852	228,870	228,870	ENSG00000236852	distal	NA	NA
X	62,551,175	A	G	false	distal	2,157	rs188405857	0.001168		0.076173	28.768	intergenic_variant	intergenic_variant	ENSG00000186767	796,052	ENSG00000236852	228,074	228,074	ENSG00000236852	intergenic_variant	ENSG00000186767	800,156	ENSG00000236852	228,074	228,074	ENSG00000236852	distal	NA	NA
X	62,551,706	A	G	true	distal	2,157	rs140470540	0.99978	MCH,MCV	0.12123	30.053	intergenic_variant	intergenic_variant	ENSG00000186767	795,521	ENSG00000236852	227,543	227,543	ENSG00000236852	intergenic_variant	ENSG00000186767	799,625	ENSG00000236852	227,543	227,543	ENSG00000236852	distal	NA	NA
X	62,551,921	C	T	false	distal	2,157	rs76575539	0.000262		0.13628	41.581	intergenic_variant	intergenic_variant	ENSG00000186767	795,306	ENSG00000236852	227,328	227,328	ENSG00000236852	intergenic_variant	ENSG00000186767	799,410	ENSG00000236852	227,328	227,328	ENSG00000236852	distal	NA	NA
X	62,551,931	C	T	false	distal	2,157	rs186312872	0.000043		0.032392	37.357	intergenic_variant	intergenic_variant	ENSG00000186767	795,296	ENSG00000236852	227,318	227,318	ENSG00000236852	intergenic_variant	ENSG00000186767	799,400	ENSG00000236852	227,318	227,318	ENSG00000236852	distal	NA	NA
X	62,552,858	C	A	false	distal	2,157	rs12834150	0.000308		0.13631	41.637	intergenic_variant	intergenic_variant	ENSG00000186767	794,369	ENSG00000236852	226,391	226,391	ENSG00000236852	intergenic_variant	ENSG00000186767	798,473	ENSG00000236852	226,391	226,391	ENSG00000236852	distal	NA	NA
X	62,553,130	T	C	false	distal	2,157	rs184850340	0.00007		0.04249	26.046	intergenic_variant	intergenic_variant	ENSG00000186767	794,097	ENSG00000236852	226,119	226,119	ENSG00000236852	intergenic_variant	ENSG00000186767	798,201	ENSG00000236852	226,119	226,119	ENSG00000236852	distal	NA	NA
X	63,643,756	C	T	false	tss_proximal	2,162	rs12558527	0.000319		0.10267	63.605	intron_variant	intron_variant	ENSG00000131089	223	ENSG00000131089	223	223	ENSG00000131089	tss_proximal	ENSG00000131089	291	ENSG00000131089	509	291	ENSG00000131089	tss_proximal	tss_prox:b1	tss_prox:b1
X	65,486,363	G	A	false	distal	2,146	rs139601040	0.000158		0.040449	44.257	intron_variant	dELS	ENSG00000102053	2,282	ENSG00000102053	2,282	2,282	ENSG00000102053	dELS	ENSG00000102053	3,837	ENSG00000227534	17,275	3,837	ENSG00000102053	distal	NA	NA
X	65,643,655	C	G	true	distal	2,147	rs6418386	0.996925	Height	0.34687	55.816	intron_variant	dELS	ENSG00000147065	23,968	ENSG00000147065	17,789	17,789	ENSG00000147065	dELS	ENSG00000147065	23,968	ENSG00000147065	23,994	23,968	ENSG00000147065	distal	NA	NA
X	66,005,662	G	T	true	distal	2,148	rs147424714	0.98822	Plt	0.014898	14.92	intergenic_variant	dELS	ENSG00000155659	16,075	ENSG00000237311	4,225	4,225	ENSG00000237311	dELS	ENSG00000155659	28,001	ENSG00000237311	5,655	5,655	ENSG00000237311	distal	NA	NA
X	66,005,668	T	A	false	distal	2,148	rs184585618	0.005009		0.005793	31.466	intergenic_variant	dELS	ENSG00000155659	16,069	ENSG00000237311	4,231	4,231	ENSG00000237311	dELS	ENSG00000155659	27,995	ENSG00000237311	5,661	5,661	ENSG00000237311	distal	NA	NA
X	66,010,477	T	C	false	distal	2,148	rs140667048	0.000042		0.020748	36.586	intergenic_variant	dELS	ENSG00000155659	11,260	ENSG00000274536	4,936	4,936	ENSG00000274536	dELS	ENSG00000155659	23,186	ENSG00000274536	4,936	4,936	ENSG00000274536	distal	NA	NA
X	66,022,315	G	A	false	missense_variant	2,134	rs41307375	0.000882		0.010642	77.919	missense_variant	missense_variant	ENSG00000155659	0	ENSG00000155659	0	0	ENSG00000155659	missense_variant	ENSG00000155659	11,348	ENSG00000284567	3,444	3,444	ENSG00000284567	missense_variant	NA	NA
X	68,700,102	G	A	true	distal	2,149	rs56008802	1	Plt	0.10194	7.6321	intron_variant	dELS	ENSG00000130052	6,275	ENSG00000130052	12,811	6,275	ENSG00000130052	dELS	ENSG00000130052	6,450	ENSG00000130052	52,432	6,450	ENSG00000130052	distal	NA	NA
X	68,703,893	G	T	false	distal	2,149	rs2050979	0.000029		0.12731	11.799	intron_variant	dELS	ENSG00000130052	9,020	ENSG00000130052	9,020	9,020	ENSG00000130052	dELS	ENSG00000130052	10,241	ENSG00000130052	56,223	10,241	ENSG00000130052	distal	NA	NA
X	69,259,233	T	C	true	distal	2,158	rs2885283	0.94164	eBMD	0.26095	43.63	intergenic_variant	intergenic_variant	ENSG00000181191	93,711	ENSG00000215162	49,308	49,308	ENSG00000215162	intergenic_variant	ENSG00000181191	93,711	ENSG00000215162	63,674	63,674	ENSG00000215162	distal	NA	NA
X	69,261,298	T	C	false	distal	2,158	rs5937195	0.004222		0.21438	47.637	intergenic_variant	intergenic_variant	ENSG00000181191	95,776	ENSG00000215162	51,373	51,373	ENSG00000215162	intergenic_variant	ENSG00000181191	95,776	ENSG00000215162	65,739	65,739	ENSG00000215162	distal	NA	NA
X	69,595,081	A	T	false	distal	2,155	rs5936703	0.000443		0.21458	196.97	intergenic_variant	CA_flank	ENSG00000158813	20,985	ENSG00000228160	18,743	18,743	ENSG00000228160	CA_flank	ENSG00000158813	20,985	ENSG00000228160	18,743	18,743	ENSG00000228160	distal	NA	NA
X	69,595,284	A	C	false	distal	2,155	rs5936704	0.000447		0.21459	196.97	intergenic_variant	CA_flank	ENSG00000158813	20,782	ENSG00000228160	18,946	18,946	ENSG00000228160	CA_flank	ENSG00000158813	20,782	ENSG00000228160	18,946	18,946	ENSG00000228160	distal	NA	NA
X	69,595,919	A	G	false	distal	2,155	rs62605720	0.000438		0.2146	196.98	intergenic_variant	CA_flank	ENSG00000158813	20,147	ENSG00000228160	19,581	19,581	ENSG00000228160	CA_flank	ENSG00000158813	20,147	ENSG00000228160	19,581	19,581	ENSG00000228160	distal	NA	NA
X	70,175,360	T	A	false	distal	2,152	rs113343074	0.000156		0.014037	18.795	intergenic_variant	pELS_flank	ENSG00000184210	2,122	ENSG00000203588	10,153	2,122	ENSG00000184210	pELS_flank	ENSG00000184210	2,122	ENSG00000203588	10,153	2,122	ENSG00000184210	distal	NA	NA
X	70,437,089	C	T	false	distal	2,132	rs6624475	0.000137		0.42555	101.22	intergenic_variant	pELS	ENSG00000130055	3,698	ENSG00000284391	1,738	1,738	ENSG00000284391	pELS	ENSG00000082458	7,745	ENSG00000284391	1,738	1,738	ENSG00000284391	distal	NA	NA
X	70,444,813	G	A	false	tss_proximal	2,151	rs113485666	0.000023		0.033564	18.527	upstream_gene_variant	PLS	ENSG00000082458	21	ENSG00000082458	322	21	ENSG00000082458	tss_proximal	ENSG00000082458	21	ENSG00000082458	322	21	ENSG00000082458	tss_proximal	tss_prox:b0	tss_prox:b0
X	70,670,451	C	T	false	missense_variant	2,136	rs4844247	0.000014		0.036405	182.58	missense_variant	missense_variant	ENSG00000120498	0	ENSG00000230187	2,443	0	ENSG00000120498	missense_variant	ENSG00000120498	53,840	ENSG00000230187	3,063	3,063	ENSG00000230187	missense_variant	NA	NA
X	70,694,275	C	A	false	distal	2,155	rs4844250	0.000206		0.23639	267.98	intron_variant	CA_flank	ENSG00000120498	11,449	ENSG00000230187	20,759	11,449	ENSG00000120498	CA_flank	ENSG00000120498	30,016	ENSG00000230187	20,759	20,759	ENSG00000230187	distal	NA	NA
X	70,713,090	C	T	false	distal	2,159	rs9697866	0.000013		0.036318	182.14	intron_variant	intron_variant	ENSG00000120498	9,527	ENSG00000230187	39,574	9,527	ENSG00000120498	intron_variant	ENSG00000120498	11,201	ENSG00000230187	39,574	11,201	ENSG00000120498	distal	NA	NA
X	70,714,968	G	C	false	distal	2,159	rs181357657	0.000023		0.04452	210.56	intron_variant	intron_variant	ENSG00000120498	7,649	ENSG00000230187	41,452	7,649	ENSG00000120498	intron_variant	ENSG00000120498	9,323	ENSG00000230187	41,452	9,323	ENSG00000120498	distal	NA	NA
X	71,068,489	G	A	false	tss_proximal	2,151	rs149145554	0.000326		0.032822	57.824	intron_variant	PLS	ENSG00000147164	40	ENSG00000147164	100	40	ENSG00000147164	tss_proximal	ENSG00000147164	40	ENSG00000147164	100	40	ENSG00000147164	tss_proximal	tss_prox:b0	tss_prox:b0
X	71,120,888	A	G	false	tss_proximal	2,140	rs4844282	0.00002		0.34349	187.91	intron_variant	intron_variant	ENSG00000184634	82	ENSG00000184634	82	82	ENSG00000184634	tss_proximal	ENSG00000184634	2,161	ENSG00000184634	251	251	ENSG00000184634	tss_proximal	tss_prox:b2	tss_prox:b0
X	71,122,970	A	G	false	tss_proximal	2,140	rs7053139	0.00003		0.32002	201.93	intron_variant	intron_variant	ENSG00000184634	95	ENSG00000184634	95	95	ENSG00000184634	tss_proximal	ENSG00000184634	2,005	ENSG00000184634	189	189	ENSG00000184634	tss_proximal	tss_prox:b2	tss_prox:b0
X	71,132,567	T	C	false	tss_proximal	2,140	rs10521349	0.00004		0.32021	198.22	intron_variant	dELS_flank	ENSG00000184634	28	ENSG00000184634	28	28	ENSG00000184634	tss_proximal	ENSG00000184634	3,452	ENSG00000184634	555	555	ENSG00000184634	tss_proximal	tss_prox:b2	tss_prox:b0
X	71,187,318	C	G	false	distal	2,139	rs111258036	0.000102		0.008905	25.746	intron_variant	TF_flank	ENSG00000196338	12,062	ENSG00000228427	3,300	3,300	ENSG00000228427	TF_flank	ENSG00000169562	25,492	ENSG00000228427	10,856	10,856	ENSG00000228427	distal	NA	NA
X	71,225,772	C	T	false	distal	2,150	rs7057082	0.003321		0.397	26.752	downstream_gene_variant	dELS	ENSG00000169562	255	ENSG00000147130	13,853	255	ENSG00000169562	dELS	ENSG00000169562	2,547	ENSG00000147130	18,697	2,547	ENSG00000169562	distal	NA	NA
X	71,225,931	T	C	false	distal	2,150	rs1997625	0.000033		0.39916	26.387	downstream_gene_variant	dELS	ENSG00000169562	414	ENSG00000147130	13,694	414	ENSG00000169562	dELS	ENSG00000169562	2,706	ENSG00000147130	18,538	2,706	ENSG00000169562	distal	NA	NA
X	71,228,180	G	T	true	distal	2,150	rs57434549	0.97236	UA	0.39238	30.265	intergenic_variant	dELS	ENSG00000169562	2,663	ENSG00000147130	11,445	2,663	ENSG00000169562	dELS	ENSG00000169562	4,955	ENSG00000147130	16,289	4,955	ENSG00000169562	distal	NA	NA
X	71,955,861	G	T	false	distal	2,143	rs12832771	0.000211		0.10633	176.02	intron_variant	dELS	ENSG00000204131	44,493	ENSG00000201392	10,110	10,110	ENSG00000201392	dELS	ENSG00000204131	45,015	ENSG00000201392	10,212	10,212	ENSG00000201392	distal	NA	NA
X	72,473,956	A	G	false	3_prime_UTR_variant	2,133	rs112939878	0.000014		0.00335	127.22	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000147099	0	ENSG00000147099	0	0	ENSG00000147099	3_prime_UTR_variant	ENSG00000147099	9,243	ENSG00000147099	1,772	1,772	ENSG00000147099	3_prime_UTR_variant	NA	NA
X	74,321,661	C	A	true	distal	2,155	rs5937272	0.97535	HbA1c	0.21859	84.388	intergenic_variant	CA_flank	ENSG00000187969	16,626	ENSG00000226515	21,051	16,626	ENSG00000187969	CA_flank	ENSG00000187969	17,480	ENSG00000226515	21,198	17,480	ENSG00000187969	distal	NA	NA
X	76,428,304	G	A	false	missense_variant	2,138	rs146995693	0.000057		0.011107	16.226	missense_variant	missense_variant	ENSG00000198934	0	ENSG00000213684	92,458	0	ENSG00000198934	missense_variant	ENSG00000198934	593	ENSG00000213684	92,458	593	ENSG00000198934	missense_variant	NA	NA
X	76,428,576	G	A	false	missense_variant	2,138	rs5982146	0.000013		0.000061	283.29	missense_variant	missense_variant	ENSG00000198934	0	ENSG00000213684	92,730	0	ENSG00000198934	missense_variant	ENSG00000198934	865	ENSG00000213684	92,730	865	ENSG00000198934	missense_variant	NA	NA
X	76,428,667	C	A	false	missense_variant	2,138	rs41298484	0.000072		0.016043	834.85	missense_variant	missense_variant	ENSG00000198934	0	ENSG00000213684	92,821	0	ENSG00000198934	missense_variant	ENSG00000198934	956	ENSG00000213684	92,821	956	ENSG00000198934	missense_variant	NA	NA
X	76,428,910	G	A	false	missense_variant	2,138	rs145140241	0.000033		0.003974	24.386	missense_variant	missense_variant	ENSG00000198934	0	ENSG00000213684	93,064	0	ENSG00000198934	missense_variant	ENSG00000198934	1,199	ENSG00000213684	93,064	1,199	ENSG00000198934	missense_variant	NA	NA
X	76,428,947	G	C	false	missense_variant	2,138	rs7051260	0.00008		0.00943	821.9	missense_variant	missense_variant	ENSG00000198934	0	ENSG00000213684	93,101	0	ENSG00000198934	missense_variant	ENSG00000198934	1,236	ENSG00000213684	93,101	1,236	ENSG00000198934	missense_variant	NA	NA
X	77,925,507	G	T	false	distal	2,146	rs112598077	0.000021		0.040979	175.02	intron_variant	dELS	ENSG00000165240	2,290	ENSG00000165240	813	813	ENSG00000165240	dELS	ENSG00000165240	14,753	ENSG00000165240	14,748	14,748	ENSG00000165240	distal	NA	NA
X	78,348,033	A	T	false	distal	2,155	rs320978	0.001386		0.22113	666.53	intergenic_variant	CA_flank	ENSG00000173198	20,341	ENSG00000173198	20,481	20,341	ENSG00000173198	CA_flank	ENSG00000173198	20,341	ENSG00000173198	20,481	20,341	ENSG00000173198	distal	NA	NA
X	78,394,718	T	A	false	distal	2,156	rs764826768	0.000145		0.001185	6.4536	intergenic_variant	intergenic_variant	ENSG00000173198	67,026	ENSG00000173198	67,166	67,026	ENSG00000173198	intergenic_variant	ENSG00000173198	67,026	ENSG00000173198	67,166	67,026	ENSG00000173198	distal	NA	NA

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